Lab Test

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Test Definition Number : 158
Test Definition Name : Gene sequencing panel (31-50 genes)
Lab Name : Sema4, Mount Sinai Venture
Lab Test Number of NEWER Version : 1264
Lab Test Number of THIS Version : 1262
Lab Test Name : Oncology Hotspot Panel (50 genes)
Status : Active
Expired : No
Updated : 2018-07-16 15:29 EDT

General Attributes

Chromosome Band :
HUGO Gene Name :
ICD-Oncology Code
(includes WHO classification diagnoses)
:

Infectious Disease Attributes

Agent Category :
Non-virus Genus and Species :
Virus Family, Genus, and Species :

Lab-specific Attributes

Method : Sequencing - Next Generation (Massively Parallel) (NGS)
Specimen Source
(for clinical patient care these sources must be validated)
: Solid Tissue Paraffin-Embedded Formalin-Fixed
ICD-10 Code :
Use : Clinical - CLIA-certified lab
Clinical - certified for NY patients
Research
Genetics Category : Acquired (somatic)
SNOMED CT : [363346000] Malignant neoplastic disease (disorder)
LOINC :
Comments : ABL1, AKT1, ALK, APC, ATM, BRAF, CDH1, CDKN2A, CSF1R, CTNNB1, EGFR, ERBB2, ERBB4, EZH2, FBXW7, FGFR1, FGFR2, FGFR3, FLT3, GNA11, GNAQ, GNAS, HNF1A, HRAS, IDH1, IDH2, JAK2, JAK3, KDR, KIT, KRAS, MET, MLH1, MPL, NOTCH1, NPM1, NRAS, PDGFRA, PIK3CA, PTEN, PTPN11, RB1, RET, SMAD4, SMARCB1, SMO, SRC, STK11, TP53, VHL
Specimen Transport Requirements : Adult and pediatric patients: • Nine (9) unstained glass slides and one (1) H&E stained glass slide. • Please note: While the Oncology Hotspot assay is designed to detect variants down to 5% allele fraction, we require a tumor specimen submission to contain at least 20% viable tumor cells to account for tumor heterogeneity. • Ship at room temperature.
Samples Available for Proficiency Test Sample Exchange : Yes

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